Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003587.1 Hibiscus syriacus cultivar Beakdansim tig00007565_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  85415

Tables:   1   

This is table  1  of  1  ( 45 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8976--9025
23
2.2
23
96
3
93
20
36
24
20
1.95
8984--9049
19
3.3
19
79
12
53
21
31
30
16
1.95
11733--11769
19
1.9
19
94
0
65
16
40
24
18
1.90
13693--13736
23
1.9
23
85
0
61
29
27
20
22
1.99
15557--15620
16
3.9
16
70
22
53
21
1
25
51
1.57
17364--17491
37
3.5
36
76
11
134
49
2
0
47
1.19
17366--17540
20
8.9
20
67
18
66
46
2
1
49
1.24
17364--17525
75
2.1
76
84
8
215
46
2
1
50
1.22
17477--17529
22
2.4
21
84
3
61
39
1
1
56
1.21
18826--18886
14
4.4
13
89
8
77
8
34
36
21
1.83
18826--18886
28
2.2
28
88
5
88
8
34
36
21
1.83
29382--29426
21
2.1
21
84
8
56
33
33
8
24
1.86
37577--37601
12
2.1
12
100
0
50
40
24
16
20
1.91
37731--37967
119
2.0
119
95
4
435
28
16
13
40
1.87
42478--42715
119
2.0
119
95
3
435
28
17
13
40
1.88
44830--45238
201
2.0
205
95
4
740
34
21
13
30
1.92
46246--46272
10
2.7
10
100
0
54
48
0
18
33
1.49
47736--47776
19
2.1
20
82
13
50
41
9
0
48
1.36
48651--48689
22
1.9
21
85
15
55
58
0
0
41
0.98
49525--49701
6
29.5
6
100
0
354
33
50
16
0
1.45
50193--50242
6
8.5
6
97
2
93
0
16
52
32
1.44
50239--50281
6
7.2
6
100
0
86
32
0
32
34
1.58
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
50198--50272
12
6.2
12
93
0
60
13
9
44
33
1.76
54258--54298
18
2.3
18
91
0
64
58
12
12
17
1.63
55674--55766
31
3.0
30
85
3
123
44
18
16
21
1.87
56178--56220
22
2.0
23
86
9
63
37
0
2
60
1.10
56258--56330
37
2.0
37
94
0
128
60
9
6
23
1.52
57122--57234
43
2.6
43
98
1
217
62
10
10
15
1.53
60594--61066
22
21.6
22
84
4
573
46
9
0
43
1.38
61032--61080
12
4.3
12
72
15
50
46
0
2
51
1.12
60594--61066
88
5.4
86
91
2
651
46
9
0
43
1.38
66710--67087
91
4.1
91
88
1
560
24
22
16
36
1.94
67391--67568
30
5.7
30
73
14
103
36
12
19
30
1.90
67391--67597
96
2.1
97
84
4
267
36
12
20
29
1.90
67484--67568
31
2.8
29
78
15
84
35
14
17
32
1.90
67587--67640
15
3.7
15
69
18
51
37
18
22
22
1.95
67521--67807
66
4.3
64
77
12
242
36
14
20
28
1.92
67677--68056
39
10.0
39
89
1
481
36
16
20
27
1.94
67809--67910
20
5.2
20
61
13
59
34
17
18
29
1.94
68030--68238
76
2.8
76
80
10
234
41
13
14
30
1.85
68123--68238
36
3.1
36
72
12
117
42
11
13
32
1.80
80581--80627
2
23.0
2
86
4
67
46
2
2
48
1.25
83676--83753
3
26.0
3
84
5
104
38
1
0
60
1.05
84806--84872
29
2.4
28
80
12
75
32
2
7
56
1.42
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
85300--85354
27
2.0
27
89
0
83
47
0
0
52
1.00

Tables:   1

The End!