Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003588.1 Hibiscus syriacus cultivar Beakdansim tig00007567_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  101522

Tables:   1   

This is table  1  of  1  ( 36 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
18101--18165
31
2.1
31
97
0
121
30
16
3
49
1.61
24629--24696
24
2.9
24
79
18
81
42
0
1
55
1.08
24627--24692
32
2.1
32
83
11
82
42
0
1
56
1.08
25097--25126
14
2.1
14
93
0
51
60
0
0
40
0.97
29930--29988
28
2.1
28
96
0
109
35
15
11
37
1.84
35883--35930
24
2.0
25
87
4
71
22
27
12
37
1.90
36685--36717
16
2.1
16
94
0
57
54
12
6
27
1.60
37135--37178
3
16.0
3
82
17
51
29
0
2
68
1.02
37132--37186
16
3.6
16
80
7
62
32
0
1
65
1.03
37125--37168
23
2.0
23
91
8
74
22
0
4
72
1.02
38617--38678
26
2.2
29
83
11
76
33
4
3
58
1.36
39851--39891
20
2.0
20
100
0
82
24
9
19
46
1.80
41258--41285
12
2.3
12
100
0
56
25
14
7
53
1.66
41259--41318
27
2.3
27
82
8
79
23
13
6
56
1.60
43255--43289
6
5.7
6
89
3
52
80
0
20
0
0.72
43255--43289
12
2.9
12
91
0
61
80
0
20
0
0.72
46550--46832
76
3.7
76
85
3
356
33
14
20
30
1.93
46547--46868
76
4.3
75
87
0
347
31
15
22
31
1.94
48605--48885
112
2.5
113
92
1
469
39
17
18
24
1.92
49023--49053
13
2.4
13
100
0
62
61
0
38
0
0.96
49037--49267
113
2.0
113
94
0
408
35
13
20
29
1.92
49268--49492
122
1.8
122
88
1
344
39
16
17
26
1.90
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
49748--49788
3
15.0
3
85
14
54
31
0
0
68
0.90
49744--49792
13
3.8
13
81
10
64
32
0
0
67
0.91
49747--49792
16
2.9
16
87
9
60
32
0
0
67
0.91
51103--51164
26
2.2
29
83
11
76
33
4
3
58
1.36
51413--51447
18
2.0
18
88
5
54
40
2
0
57
1.14
51417--51486
28
2.6
28
82
14
85
34
1
1
62
1.13
53613--53646
11
3.0
11
91
4
50
20
8
8
61
1.52
55951--56152
102
2.0
102
88
1
298
41
18
17
21
1.90
61074--61103
11
2.8
11
95
5
53
76
0
10
13
1.01
61232--61293
26
2.5
26
89
7
85
46
9
1
41
1.46
61232--61293
23
2.5
26
89
7
94
46
9
1
41
1.46
62702--62734
16
2.0
17
88
5
50
9
3
12
75
1.14
98016--98088
21
3.4
21
70
18
53
24
36
23
15
1.93
100294--100318
13
1.9
13
100
0
50
44
8
8
40
1.63

Tables:   1

The End!