Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003602.1 Hibiscus syriacus cultivar Beakdansim tig00007617_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  60207

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2458--2503
2
23.0
2
100
0
92
50
0
0
50
1.00
2575--2614
21
1.9
21
85
10
55
55
0
17
27
1.43
7429--7482
21
2.5
21
81
3
63
20
0
50
29
1.49
10112--10170
26
2.2
27
84
6
84
45
22
1
30
1.62
10500--10540
18
2.3
18
100
0
82
48
14
9
26
1.75
11143--11221
28
2.9
28
96
1
142
53
22
0
24
1.47
23446--23568
63
2.0
63
85
6
169
45
8
1
43
1.45
29352--29404
22
2.4
21
76
14
54
52
0
3
43
1.19
29333--29396
21
3.0
21
78
13
69
50
1
3
45
1.27
31190--31214
13
1.9
13
100
0
50
88
0
12
0
0.53
31498--31530
6
5.5
6
100
0
66
15
0
0
84
0.61
41235--41271
18
2.0
18
94
5
65
54
0
0
45
1.00
45366--45446
40
2.0
40
100
0
162
19
9
9
60
1.56
49594--49661
35
1.9
35
100
0
136
33
23
20
22
1.97
49890--49932
17
2.5
17
100
0
86
55
9
0
34
1.32
49954--49980
14
1.9
14
100
0
54
0
51
0
48
1.00
50154--50207
24
2.2
24
78
15
58
42
22
5
29
1.76
51780--51806
14
1.9
14
100
0
54
29
25
0
44
1.54
59439--59478
19
2.1
19
90
4
62
22
47
17
12
1.81

Tables:   1

The End!