Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000361.1 Hibiscus syriacus cultivar Beakdansim tig00000657_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  127243

Tables:   1   

This is table  1  of  1  ( 51 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10369--10404
11
3.2
11
92
4
54
36
0
2
61
1.11
10400--10470
3
23.7
3
100
0
142
66
0
0
33
0.92
11708--11812
41
2.6
40
92
3
174
19
23
9
47
1.78
10790--11769
113
8.7
113
95
0
1636
29
18
13
37
1.89
12563--13146
83
7.1
83
96
2
1059
36
21
13
29
1.91
12563--13146
248
2.4
248
98
0
1114
36
21
13
29
1.91
13700--13736
19
1.9
19
88
0
56
48
5
8
37
1.56
14083--14129
6
7.7
6
81
13
60
0
19
0
80
0.70
14084--14134
20
2.5
19
84
12
66
0
17
0
82
0.67
26636--26695
26
2.3
26
97
0
111
20
25
51
3
1.62
26910--26945
11
3.2
11
92
4
54
36
0
2
61
1.11
26941--27046
3
35.7
3
96
1
196
65
0
0
33
1.00
33745--34228
242
2.0
242
100
0
968
23
22
23
30
1.99
36531--36580
21
2.4
21
100
0
100
24
30
28
18
1.97
37019--37048
13
2.2
14
94
5
53
40
0
13
46
1.43
36982--37125
67
2.1
67
97
0
261
33
13
8
44
1.74
37086--37115
13
2.2
14
94
5
53
40
0
13
46
1.43
37681--37719
21
1.9
20
84
5
51
41
10
25
23
1.86
39391--39449
23
2.7
21
75
10
55
20
27
30
22
1.98
39400--39444
23
2.0
23
95
0
81
22
26
28
22
1.99
39377--39460
21
3.9
21
76
11
80
21
26
28
23
1.99
43455--43613
65
2.5
63
82
7
178
31
23
17
27
1.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
51400--51451
21
2.5
21
93
0
86
17
36
15
30
1.91
52895--52930
11
3.4
11
96
3
65
58
8
25
8
1.55
55142--55183
17
2.5
17
100
0
84
4
7
21
66
1.35
55989--56033
22
2.1
21
87
4
63
28
8
0
62
1.25
60382--60407
7
3.7
7
100
0
52
26
0
0
73
0.84
63029--63066
18
2.1
19
90
9
62
63
0
0
36
0.95
63025--63072
18
2.5
20
77
22
57
62
0
0
37
0.95
63894--63927
2
17.0
2
100
0
68
50
0
0
50
1.00
66378--66458
25
3.1
26
74
10
85
39
1
3
55
1.25
66767--66802
3
12.3
3
94
5
65
36
0
0
63
0.94
70054--70089
16
2.2
17
90
5
56
27
16
27
27
1.97
80047--80092
18
2.7
17
83
9
58
80
2
17
0
0.81
81195--81383
54
3.5
54
87
3
265
33
17
25
23
1.96
81194--81441
54
4.6
54
86
6
247
33
16
25
23
1.96
81194--81564
55
6.8
54
81
7
261
34
14
25
24
1.94
81194--81590
110
3.6
108
77
9
324
34
15
25
24
1.94
81857--81898
3
14.3
3
95
5
77
35
0
0
64
0.94
86436--86474
15
2.4
17
83
16
55
35
0
0
64
0.94
86444--86480
16
2.4
15
90
4
56
43
0
0
56
0.99
86552--86656
55
1.9
54
84
5
140
34
4
0
60
1.24
86550--86676
30
4.3
30
70
18
115
35
4
0
59
1.24
86782--86837
16
3.2
17
75
12
51
53
3
0
42
1.18
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
88805--88850
23
2.0
23
95
0
83
39
0
6
54
1.26
88984--89041
29
2.0
30
93
3
100
46
1
5
46
1.35
93914--93951
15
2.5
15
86
0
58
55
2
2
39
1.28
109164--109202
19
2.1
19
85
0
51
10
17
5
66
1.39
117312--117351
22
1.9
22
85
10
57
30
25
25
20
1.99
118601--118724
31
4.0
31
78
6
133
31
21
17
29
1.96
122351--122411
32
1.9
32
83
6
79
26
26
26
21
1.99

Tables:   1

The End!