Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003616.1 Hibiscus syriacus cultivar Beakdansim tig00007646_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58688

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
738--879
21
6.6
20
67
24
67
26
2
4
66
1.24
1161--1212
3
18.0
3
88
7
81
34
1
0
63
1.06
1161--1212
17
3.0
17
91
2
86
34
1
0
63
1.06
2193--2238
22
2.1
22
88
4
67
60
10
4
23
1.47
2403--2462
31
1.9
32
96
3
113
28
6
20
45
1.76
4159--4183
4
6.2
4
100
0
50
28
0
0
72
0.86
4699--4724
11
2.4
11
100
0
52
42
19
0
38
1.51
37117--37180
2
32.0
2
100
0
128
50
0
0
50
1.00
40671--40698
4
7.0
4
100
0
56
25
0
0
75
0.81
40671--40823
12
13.9
11
68
20
65
26
2
3
66
1.22
41114--41167
3
18.0
3
96
0
99
33
1
0
64
1.04
42149--42194
22
2.1
22
88
4
67
60
10
4
23
1.47
42333--42392
31
1.9
32
96
3
113
28
6
20
45
1.76
44098--44122
4
6.2
4
100
0
50
28
0
0
72
0.86
44640--44665
11
2.4
11
100
0
52
42
19
0
38
1.51
55095--55169
37
2.0
37
100
0
150
10
33
32
24
1.89

Tables:   1

The End!