Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003617.1 Hibiscus syriacus cultivar Beakdansim tig00007648_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  53175

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1805--1880
31
2.6
28
76
17
73
73
1
5
19
1.09
1802--1872
31
2.2
31
85
9
90
73
1
5
19
1.11
5051--5153
35
2.9
36
88
4
154
32
3
18
45
1.67
5053--5113
21
3.2
21
68
29
64
34
3
19
42
1.68
5059--5166
35
3.0
36
85
6
139
29
3
18
48
1.65
9672--9732
21
3.2
21
63
29
55
34
3
19
42
1.68
9670--9772
35
2.9
36
88
4
154
32
4
19
43
1.72
25342--25398
30
1.9
30
88
0
87
40
10
0
49
1.37
28379--28405
12
2.2
12
100
0
54
22
0
14
62
1.31
28506--28552
9
4.9
10
75
19
55
17
27
31
23
1.96
28506--28552
19
2.5
19
93
6
78
17
27
31
23
1.96
28562--28715
29
5.3
29
85
3
175
38
5
20
35
1.75
28561--28730
87
2.0
86
82
5
209
37
4
21
36
1.74
28562--28724
58
2.8
58
83
2
202
38
4
20
36
1.75
33461--33989
41
13.0
41
78
3
449
28
19
18
34
1.95
33680--33979
121
2.5
120
81
4
332
27
19
17
35
1.94
33598--33989
203
1.9
203
80
5
461
28
19
17
34
1.94
37160--37213
26
2.1
26
100
0
108
18
18
11
51
1.74
38060--38601
43
12.6
42
84
3
672
24
24
18
32
1.97

Tables:   1

The End!