Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003625.1 Hibiscus syriacus cultivar Beakdansim tig00007671_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  89504

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
74--126
23
2.3
23
80
0
61
56
9
15
18
1.65
4229--4313
34
2.5
34
100
0
170
36
14
24
24
1.93
5663--5693
8
3.8
8
95
4
53
58
0
0
41
0.98
9940--10012
36
1.9
38
89
10
114
12
34
5
47
1.64
10303--10349
21
2.2
21
100
0
94
27
23
23
25
2.00
26075--26108
3
11.3
3
100
0
68
32
0
0
67
0.91
26521--26563
16
2.7
16
82
7
52
65
2
2
30
1.18
49379--49422
12
3.6
12
79
14
54
20
11
0
68
1.20
49371--49428
25
2.3
27
85
11
86
24
8
0
67
1.18
49416--49478
23
2.7
23
85
4
74
26
6
6
60
1.45
49443--49491
23
2.1
23
92
0
80
26
8
6
59
1.50
64933--65004
20
3.6
20
94
0
108
33
19
15
31
1.93
66280--66322
19
2.2
20
83
4
52
25
16
6
51
1.69
69748--69798
2
25.5
2
100
0
102
49
0
0
50
1.00
74077--74116
21
1.9
21
89
0
62
30
7
7
55
1.56
76030--76078
19
2.7
17
84
9
53
26
20
28
24
1.99
76050--76206
65
2.4
65
83
8
189
26
18
24
31
1.98

Tables:   1

The End!