Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000363.1 Hibiscus syriacus cultivar Beakdansim tig00000662_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61588

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13951--14105
60
2.6
60
84
4
179
38
6
24
30
1.80
13951--14133
60
3.0
60
81
7
167
40
6
23
29
1.80
16661--16710
22
2.3
22
82
0
55
46
16
20
18
1.85
17561--17684
31
4.0
31
77
10
110
33
20
17
29
1.95
19326--19488
65
2.5
64
81
6
177
32
19
22
25
1.97
19496--19533
20
1.9
20
94
0
67
31
21
21
26
1.98
20683--20741
30
2.0
29
83
3
73
37
6
22
33
1.80
20972--21085
23
5.0
23
80
0
129
21
26
25
27
1.99
20972--21086
46
2.5
46
91
0
185
21
26
25
26
2.00
23338--23489
50
3.0
51
82
5
191
24
6
11
57
1.56
25693--26158
216
2.2
216
85
2
627
21
17
18
42
1.89
35394--35465
37
2.0
36
86
8
101
22
13
11
52
1.72
36184--36222
20
1.9
21
89
5
62
30
10
12
46
1.75
41591--41638
18
2.5
20
86
6
73
70
6
6
16
1.28
42469--42516
23
2.0
24
84
4
62
43
2
0
54
1.12
54974--55067
3
31.3
3
93
0
152
34
4
0
61
1.15
55601--55634
14
2.3
15
90
5
52
73
2
23
0
0.97

Tables:   1

The End!