Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003630.1 Hibiscus syriacus cultivar Beakdansim tig00007688_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  59540

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
14224--14271
21
2.3
21
85
0
60
37
8
8
45
1.64
14885--14932
25
2.0
24
87
4
69
45
0
0
54
0.99
18009--18044
18
2.0
18
100
0
72
33
33
5
27
1.80
18892--18933
20
2.1
20
82
8
50
28
9
0
61
1.27
23214--23251
2
19.0
2
100
0
76
50
0
0
50
1.00
34826--35050
36
6.3
36
82
1
281
34
21
23
20
1.97
36151--36375
36
6.3
36
82
1
281
34
21
23
20
1.97
37478--37702
36
6.3
36
82
1
281
34
21
23
20
1.97
40384--40437
26
2.1
26
96
0
99
44
3
22
29
1.70
43005--43093
30
3.0
30
83
5
108
39
38
4
17
1.71
46997--47186
63
3.0
63
91
0
317
33
16
18
31
1.94
46997--47156
32
5.1
31
76
11
164
31
17
18
31
1.94
47160--47213
16
3.4
16
70
14
58
40
12
16
29
1.86
47002--47250
31
8.0
31
78
7
225
32
16
18
32
1.94
47986--48013
14
2.0
14
100
0
56
21
14
21
42
1.88
49775--49839
29
2.2
31
94
5
116
66
4
0
29
1.12
50853--50896
22
2.0
22
90
4
70
61
0
0
38
0.96
50855--50909
19
2.6
21
86
11
69
54
0
0
45
0.99
50929--50953
12
2.1
12
100
0
50
28
24
8
40
1.83
58817--58843
13
2.1
13
100
0
54
18
7
0
74
1.05

Tables:   1

The End!