Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003633.1 Hibiscus syriacus cultivar Beakdansim tig00007693_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  85776

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1846--1893
2
24.0
2
100
0
96
50
0
0
50
1.00
6155--6194
21
1.9
21
89
0
62
30
7
7
55
1.56
8111--8159
19
2.7
17
84
9
53
26
20
28
24
1.99
8131--8288
65
2.5
64
84
7
196
26
18
24
31
1.98
22441--22513
18
3.9
18
80
7
92
27
30
23
19
1.98
24275--24307
16
2.0
17
88
5
50
27
6
6
60
1.44
25119--25143
2
12.5
2
100
0
50
52
0
0
48
1.00
30857--31061
64
3.2
64
81
4
209
34
20
18
27
1.96
31004--31107
45
2.3
45
98
0
199
37
25
10
26
1.88
31782--31905
31
4.0
31
95
4
216
19
19
22
38
1.93
40324--40547
64
3.5
64
82
4
231
33
20
19
27
1.96
41201--41325
31
4.0
31
93
2
216
20
18
22
38
1.93
43050--43113
29
2.2
29
91
0
101
43
7
10
37
1.69
50858--50888
2
15.5
2
100
0
62
51
0
0
48
1.00
55803--55829
5
5.4
5
100
0
54
18
0
62
18
1.32
57281--57314
17
2.0
17
88
0
50
44
5
5
44
1.52
57365--57404
19
2.0
21
85
9
57
47
7
2
42
1.45
63137--63192
25
2.5
22
71
20
53
51
1
12
33
1.50
65466--65639
87
2.0
87
93
0
294
38
21
14
25
1.91
72341--72378
18
2.2
17
86
9
51
65
5
0
28
1.14
72339--72379
17
2.3
19
80
16
52
65
4
0
29
1.13
80499--80531
2
16.5
2
100
0
66
48
0
0
51
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
82601--82647
16
3.0
15
77
20
51
68
0
2
29
1.02
82783--82845
32
1.9
34
81
12
78
61
0
1
36
1.05

Tables:   1

The End!