Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000364.1 Hibiscus syriacus cultivar Beakdansim tig00000664_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61401

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2703--2729
2
13.5
2
100
0
54
48
0
0
51
1.00
3909--4250
175
2.0
170
90
5
548
29
7
7
55
1.55
17183--17235
24
2.2
24
90
3
81
50
16
16
15
1.78
23826--23859
15
2.3
15
94
0
59
17
17
29
35
1.93
25763--25815
23
2.4
22
84
6
63
37
1
1
58
1.20
30031--30079
20
2.4
20
82
3
62
18
20
22
38
1.93
41955--42020
26
2.6
25
72
13
62
53
6
1
39
1.35
44438--44480
21
2.0
21
91
8
70
16
39
27
16
1.90
45756--45803
19
2.5
20
82
3
62
52
6
12
29
1.63
47178--47257
19
4.1
20
80
7
101
21
35
30
13
1.92
47180--47257
40
2.0
40
92
0
129
21
33
30
14
1.93
57209--57333
32
4.0
31
75
8
110
28
17
21
32
1.96
57209--57329
63
1.9
63
85
6
165
28
17
21
33
1.96
57337--57393
30
1.9
30
100
0
114
22
21
24
31
1.98
59586--59640
24
2.3
24
74
0
56
49
1
0
49
1.11
59572--59647
39
2.0
36
85
7
98
47
2
0
50
1.15
61083--61117
18
2.0
18
88
5
54
51
0
11
37
1.38
61360--61394
17
2.1
17
88
0
52
28
2
2
65
1.21

Tables:   1

The End!