Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003641.1 Hibiscus syriacus cultivar Beakdansim tig00007722_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  51461

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1023--1053
3
10.0
3
93
6
53
67
0
0
32
0.91
5611--5657
23
2.0
23
83
4
58
34
4
2
59
1.29
5617--5666
23
2.2
23
85
7
66
30
2
2
66
1.14
7913--7968
20
2.8
20
86
0
76
46
8
17
26
1.78
8125--8197
36
2.0
36
82
10
87
46
4
2
46
1.36
10756--10792
20
1.9
19
89
10
58
45
10
24
18
1.81
15079--15105
4
6.8
4
100
0
54
51
22
0
25
1.48
15878--15915
2
19.0
2
89
10
60
50
2
0
47
1.15
18532--18604
30
2.4
30
93
0
119
30
23
20
26
1.99
18590--18717
31
4.1
31
77
9
134
34
19
18
27
1.95
18593--18714
63
2.0
62
87
8
176
32
18
19
28
1.96
22217--22289
30
2.4
30
90
0
110
30
21
20
27
1.98
22275--22402
31
4.1
31
79
6
141
33
20
18
27
1.96
22272--22400
63
2.1
61
85
9
181
32
19
20
27
1.97
23735--23774
20
2.0
20
85
0
53
17
22
30
30
1.97
27704--27738
18
2.0
17
88
5
52
71
0
0
28
0.86
31832--32000
87
2.0
83
81
11
198
34
28
10
27
1.89
34781--34829
2
24.5
2
100
0
98
51
0
48
0
1.00
38187--38238
19
2.8
19
77
11
56
63
1
1
32
1.16
43006--43051
19
2.4
18
82
7
56
47
4
2
45
1.34
47462--47529
30
2.2
32
80
15
81
48
10
1
39
1.46

Tables:   1

The End!