Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003643.1 Hibiscus syriacus cultivar Beakdansim tig00007736_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  56573

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1687--1744
26
2.3
25
85
8
82
29
6
13
50
1.68
2074--2109
19
1.9
19
88
5
56
19
5
11
63
1.46
4256--4535
143
1.9
143
80
11
322
45
5
15
33
1.70
4625--4672
25
2.0
24
83
4
60
64
4
0
31
1.12
14679--14724
24
1.9
24
86
8
67
30
15
26
28
1.96
21263--21334
27
2.7
27
100
0
144
51
2
8
37
1.47
24908--24953
12
3.8
12
97
0
83
21
8
19
50
1.75
27190--27220
16
1.9
16
100
0
62
25
19
19
35
1.95
33861--33898
2
19.0
2
100
0
76
50
0
0
50
1.00
34237--34397
60
2.7
60
91
0
252
36
9
16
37
1.82
36034--36162
21
6.3
19
78
15
107
22
21
20
35
1.96
36024--36155
42
3.2
42
84
10
148
21
20
19
38
1.93
36024--36155
63
2.1
63
94
4
232
21
20
19
38
1.93
36086--36169
42
2.0
42
92
0
141
25
21
19
34
1.96
36248--36292
6
7.5
6
100
0
90
33
51
15
0
1.44
36917--37081
21
7.9
21
81
9
169
30
23
21
24
1.99
37071--37123
21
2.5
21
96
0
97
20
24
26
28
1.99
38339--38373
18
1.9
18
88
0
52
74
0
8
17
1.06
38339--38389
23
2.2
23
86
6
68
74
0
9
15
1.06
38976--39024
25
2.0
25
83
0
62
65
4
12
18
1.41
46232--47283
81
13.0
81
88
0
1494
30
20
12
37
1.89
47190--47230
22
1.9
22
85
5
57
29
21
2
46
1.64

Tables:   1

The End!