Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003646.1 Hibiscus syriacus cultivar Beakdansim tig00007751_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  107168

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5329--5365
10
3.9
10
79
13
51
56
0
0
43
0.99
5603--5777
97
1.8
96
86
4
257
28
17
17
37
1.92
5603--5875
93
2.9
91
80
8
277
28
15
19
36
1.92
5957--6076
20
6.0
20
88
0
159
35
23
17
23
1.95
9205--9321
21
5.4
21
77
11
103
35
25
15
23
1.94
9191--9302
23
5.0
23
73
9
90
32
24
16
26
1.96
9191--9320
67
2.0
65
89
3
197
33
24
16
25
1.96
23107--23146
13
3.0
13
82
7
53
37
0
0
62
0.95
32862--32904
13
3.2
13
80
6
50
37
2
2
58
1.24
32223--33474
620
2.0
621
94
0
2193
37
12
17
32
1.87
33148--33773
311
2.0
311
92
0
1045
34
12
21
31
1.91
32528--34406
931
2.0
931
95
0
3373
36
12
18
32
1.88
34488--34527
13
3.0
13
82
7
53
37
0
0
62
0.95
36133--38066
969
2.0
969
92
0
3210
37
11
16
34
1.85
45484--45523
13
3.0
13
82
7
53
37
2
0
60
1.11
57826--59264
722
2.0
713
90
2
2274
39
11
15
34
1.83
86055--86232
94
1.9
95
86
1
259
39
12
21
25
1.89
86055--86269
94
2.3
94
81
2
252
38
13
22
25
1.91
86648--88338
81
21.0
81
89
0
2435
37
12
20
30
1.89
99231--99271
22
1.9
22
85
5
57
46
2
21
29
1.64
99178--100229
81
13.0
81
88
1
1491
37
12
20
30
1.89

Tables:   1

The End!