Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000365.1 Hibiscus syriacus cultivar Beakdansim tig00000665_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  83057

Tables:   1   

This is table  1  of  1  ( 36 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
491--576
43
2.0
43
97
0
163
33
27
9
29
1.88
13028--13135
35
3.0
36
91
6
175
45
20
5
28
1.73
13067--13127
21
3.2
21
65
29
64
42
21
4
31
1.74
17652--17725
37
2.0
37
91
0
121
44
16
5
33
1.70
17858--17899
21
2.0
21
100
0
84
14
14
28
42
1.84
31152--31227
36
2.1
36
95
0
134
44
14
9
31
1.76
35703--35732
15
2.0
15
100
0
60
13
46
26
13
1.80
36154--36229
36
2.1
36
97
0
143
43
14
10
31
1.79
37932--37982
19
2.6
19
96
3
93
37
9
15
37
1.81
39022--39133
31
3.6
31
97
0
206
41
12
12
33
1.81
43562--43621
20
3.4
17
71
22
52
70
0
6
23
1.11
46746--46807
21
2.7
24
80
14
69
40
0
3
56
1.15
46799--46889
43
2.1
43
86
6
123
54
2
2
40
1.24
50863--50889
3
9.0
3
100
0
54
33
0
0
66
0.92
52039--52068
2
15.0
2
100
0
60
50
0
0
50
1.00
52296--52372
37
2.0
38
82
9
95
38
31
5
24
1.77
52416--52484
20
3.2
21
76
12
70
52
2
1
43
1.25
53097--53130
3
11.7
3
93
6
61
35
0
0
64
0.94
54704--54728
6
4.2
6
100
0
50
16
0
0
84
0.63
55221--55546
131
2.5
130
79
4
352
33
10
16
39
1.83
58885--58937
25
2.1
27
82
10
67
33
0
16
49
1.47
59816--59862
2
23.5
2
100
0
94
48
0
0
51
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
61891--61955
19
3.3
19
70
16
60
21
16
23
38
1.93
61907--61976
21
3.5
20
78
7
79
20
20
27
32
1.97
61891--61980
40
2.2
40
94
0
153
20
18
23
37
1.94
61901--61967
19
3.4
19
74
8
71
23
19
23
32
1.97
69313--69364
16
3.4
16
69
15
56
48
7
9
34
1.65
69311--69378
29
2.3
29
100
0
136
44
7
8
39
1.64
69674--69846
35
4.9
35
85
5
233
32
19
19
28
1.96
69674--69849
71
2.5
69
87
3
253
32
19
19
28
1.96
69911--70067
78
2.0
78
89
0
242
43
15
20
20
1.87
72443--72482
16
2.4
16
87
4
53
50
2
0
47
1.14
72632--72693
26
2.3
28
91
5
101
35
8
0
56
1.29
73027--73071
20
2.3
20
80
3
56
46
4
2
46
1.35
80011--80053
13
3.4
13
83
6
52
23
23
2
51
1.60
80094--80161
19
3.6
19
82
2
84
29
20
5
44
1.75

Tables:   1

The End!