Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003652.1 Hibiscus syriacus cultivar Beakdansim tig00007759_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  54650

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11326--11409
15
5.7
15
73
16
59
78
0
13
8
0.96
12330--12620
53
5.4
55
73
12
237
32
16
24
27
1.96
12463--12911
107
4.2
107
84
5
534
33
16
23
26
1.96
12498--12919
51
8.0
51
79
10
366
32
16
23
26
1.96
12498--12919
209
2.0
211
85
2
571
32
16
23
26
1.96
12446--12970
54
9.8
53
78
6
386
32
17
24
25
1.96
16491--16615
63
2.0
62
83
7
155
40
4
8
47
1.54
17668--17709
2
21.5
2
95
4
77
50
0
0
50
1.00
20873--20932
21
2.8
22
78
12
63
48
25
0
26
1.52
20916--20959
20
2.2
20
95
0
79
47
27
0
25
1.52
28449--28561
35
3.2
34
86
5
145
42
21
0
35
1.59
29588--29699
35
3.2
34
85
2
143
35
0
21
41
1.59
30867--30898
16
2.0
16
100
0
64
43
18
12
25
1.85
30870--30905
16
2.2
16
90
0
54
44
19
16
19
1.87
35744--35904
80
2.0
80
100
0
322
29
18
13
37
1.90
37060--37113
2
27.0
2
100
0
108
50
0
0
50
1.00
38554--38599
16
2.9
16
77
22
53
60
2
0
36
1.09
42467--42582
39
3.1
38
80
8
112
34
13
0
50
1.48
43931--43960
13
2.3
13
94
0
51
30
13
0
56
1.37
45095--45138
17
2.5
18
96
3
81
27
38
11
22
1.88
49351--49390
21
1.9
21
94
0
71
52
0
2
45
1.14

Tables:   1

The End!