Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003656.1 Hibiscus syriacus cultivar Beakdansim tig00007775_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  67193

Tables:   1   

This is table  1  of  1  ( 36 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2974--3012
21
1.9
21
89
5
62
17
25
23
33
1.96
2975--3044
28
2.4
28
88
4
95
17
28
24
30
1.97
2975--3044
9
7.3
9
73
12
59
17
28
24
30
1.97
2995--3044
19
2.7
19
76
14
59
16
30
26
28
1.96
3039--3080
14
3.1
14
89
3
68
21
47
21
9
1.79
3055--3089
16
2.1
16
89
10
52
20
42
25
11
1.85
3053--3094
18
2.3
19
80
19
54
19
42
23
14
1.87
15109--15287
59
3.0
59
61
18
136
26
18
26
28
1.98
15109--15350
118
2.1
118
95
0
430
26
18
26
29
1.98
15142--15324
59
3.1
59
68
17
171
28
17
25
28
1.97
16311--16373
18
3.4
20
85
14
91
47
4
0
47
1.23
16696--16749
10
5.2
11
86
8
62
46
0
3
50
1.19
16703--16749
2
23.5
2
91
0
76
46
0
4
48
1.21
16872--16915
20
2.2
21
80
15
58
50
0
25
25
1.50
17118--17265
4
37.0
4
94
0
260
22
0
27
50
1.50
17228--17609
8
47.5
8
98
1
710
12
11
37
38
1.80
17825--17873
15
3.1
15
80
11
62
48
8
0
42
1.32
17825--17864
17
2.4
17
91
0
62
47
10
0
42
1.37
17899--17928
14
2.1
14
93
0
51
50
33
0
16
1.46
18269--18320
19
2.7
20
90
3
79
51
7
1
38
1.42
18401--18451
7
7.3
7
81
0
57
47
31
0
21
1.51
19331--19369
2
19.0
2
94
5
69
48
0
2
48
1.15
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
19367--19461
48
2.0
49
89
2
147
50
9
8
31
1.65
19856--19901
2
23.0
2
100
0
92
50
0
0
50
1.00
19976--20035
21
2.9
21
75
5
50
53
26
0
20
1.46
20332--20384
22
2.3
22
87
9
70
39
1
0
58
1.09
20581--20615
16
2.2
16
94
0
61
40
11
25
22
1.88
22932--22987
24
2.3
25
82
14
73
5
25
0
69
1.09
24130--24175
18
2.5
18
86
10
58
19
30
17
32
1.95
30806--30852
20
2.4
20
85
3
69
36
21
10
31
1.88
51215--51252
6
6.5
6
88
11
53
0
2
13
84
0.73
56818--57190
187
2.0
187
97
0
701
42
16
13
27
1.87
58975--59065
45
2.0
45
100
0
182
19
24
12
43
1.85
59611--59893
82
3.4
82
80
4
302
34
18
14
32
1.91
59585--59888
164
1.8
165
82
3
389
35
18
13
31
1.90
65143--65270
65
2.0
64
86
4
177
28
23
15
32
1.95

Tables:   1

The End!