Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003658.1 Hibiscus syriacus cultivar Beakdansim tig00007781_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  62884

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
54--97
20
2.2
20
92
4
72
31
4
18
45
1.69
6324--6366
2
21.5
2
100
0
86
48
0
0
51
1.00
7290--7329
18
2.2
18
90
0
62
47
17
15
20
1.83
14008--14040
17
2.0
16
94
5
57
0
18
3
78
0.87
14034--14088
23
2.3
25
78
12
62
9
14
16
60
1.59
18264--18297
10
3.3
10
88
8
50
0
20
0
79
0.73
18279--18338
23
2.5
25
81
5
70
8
15
13
63
1.51
21800--21880
30
2.7
30
92
0
135
29
16
30
23
1.96
23765--23868
18
5.2
20
60
17
54
41
5
4
48
1.48
23766--23891
40
3.2
40
100
0
252
41
7
4
46
1.52
23875--24047
90
1.9
89
90
1
274
45
6
9
38
1.63
28388--28428
14
2.8
14
92
7
64
80
9
9
0
0.91
28385--28431
22
2.1
21
85
14
60
82
8
8
0
0.83
28405--28442
20
1.9
20
88
0
58
78
10
10
0
0.95
32240--32346
43
2.3
45
81
15
112
32
1
14
51
1.53
33429--33460
13
2.5
13
94
0
55
18
53
12
15
1.73
33484--33575
2
47.5
2
72
6
64
51
0
0
48
1.00
33589--33623
12
3.0
12
87
4
54
28
48
14
8
1.73
39530--39566
19
1.9
19
88
0
56
40
8
10
40
1.70
43450--43500
19
2.6
20
84
3
68
45
5
15
33
1.71
46228--46292
17
4.0
16
68
9
51
60
0
16
23
1.36
46240--46302
32
1.9
34
84
12
87
57
0
19
23
1.41
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
49367--49411
22
2.1
21
87
4
63
33
31
2
33
1.70
59959--59998
6
6.7
6
83
11
55
80
2
17
0
0.83
59959--59998
13
3.3
12
82
10
55
80
2
17
0
0.83
59953--59998
24
1.9
23
86
8
65
78
4
17
0
0.91

Tables:   1

The End!