Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003659.1 Hibiscus syriacus cultivar Beakdansim tig00007788_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  93818

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
664--690
13
2.1
13
100
0
54
44
0
0
55
0.99
41800--41904
37
2.8
37
85
0
138
40
14
14
30
1.85
42430--42478
19
2.5
19
81
12
55
30
4
0
65
1.11
42668--42703
18
1.9
19
88
5
56
30
5
0
63
1.17
42759--42825
24
2.8
23
76
14
64
17
10
0
71
1.13
43134--43169
13
2.8
13
91
0
63
30
44
19
5
1.73
47263--47347
9
9.0
9
69
18
57
78
5
15
0
0.93
47266--47331
17
4.1
17
76
20
63
78
6
15
0
0.93
47263--47353
37
2.4
38
81
13
100
79
5
15
0
0.91
47270--47354
18
4.3
20
76
14
70
78
4
16
0
0.91
48922--49979
106
10.0
106
87
2
1425
34
24
18
23
1.96
50678--50783
37
2.9
37
84
0
140
39
16
14
29
1.88
51376--51402
2
13.5
2
100
0
54
48
0
0
51
1.00
51606--51630
2
12.5
2
100
0
50
48
0
0
52
1.00
51649--51687
15
2.5
16
83
8
53
17
7
0
74
1.05
59320--59456
59
2.3
59
79
2
168
28
18
24
28
1.98
59538--59624
45
1.9
45
90
0
138
34
8
24
33
1.85
65768--65904
59
2.3
59
79
2
168
28
18
24
28
1.98
65986--66072
45
1.9
45
90
0
138
34
8
24
33
1.85
80541--80582
14
2.9
15
89
3
59
50
2
2
45
1.27

Tables:   1

The End!