Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003670.1 Hibiscus syriacus cultivar Beakdansim tig00007843_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  52201

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2053--2569
43
12.2
43
79
6
502
25
19
20
34
1.96
2053--2569
85
6.1
85
79
6
539
25
19
20
34
1.96
15780--15829
16
3.1
17
78
18
61
72
0
2
26
0.96
16597--16646
23
2.2
23
85
7
66
16
18
16
50
1.79
16608--16658
23
2.2
23
89
0
75
11
19
13
54
1.69
20218--20531
154
2.0
154
93
1
540
37
15
19
27
1.92
24670--24702
13
2.5
13
95
0
57
18
27
18
36
1.94
24949--25026
40
2.0
40
87
5
113
34
16
14
34
1.89
26298--26348
18
2.9
17
80
11
59
25
3
0
70
1.04
27254--27392
42
3.3
42
85
2
181
21
25
15
37
1.93
29792--29824
14
2.4
14
94
0
57
33
6
30
30
1.82
32739--32918
42
4.3
42
68
9
102
31
16
18
33
1.93
32822--33092
83
3.3
83
76
3
249
35
15
15
33
1.89
32962--33092
41
3.2
41
71
12
115
38
16
12
32
1.85
32745--33001
125
2.1
125
82
2
311
33
15
16
33
1.91
37670--37733
23
2.8
23
85
0
83
34
26
23
15
1.95
40564--40605
18
2.3
18
80
8
50
78
2
19
0
0.86
44152--44390
128
1.9
128
87
1
354
34
15
13
36
1.87
50283--50385
36
2.9
36
70
21
92
34
22
14
28
1.93
51120--51279
75
2.1
75
85
5
225
31
5
9
53
1.54

Tables:   1

The End!