Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003677.1 Hibiscus syriacus cultivar Beakdansim tig00007857_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  52237

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10594--10635
17
2.5
17
88
0
66
30
11
7
50
1.66
12420--12502
30
2.8
30
81
7
96
57
10
8
22
1.59
15421--15886
226
2.1
222
85
7
613
27
12
19
40
1.88
17096--17137
21
2.0
21
86
4
59
11
9
19
59
1.59
22288--22365
21
3.7
21
89
1
120
53
23
3
19
1.61
22288--22372
7
12.0
7
79
1
80
54
23
3
18
1.59
22883--22928
24
1.9
24
95
0
83
41
8
13
36
1.75
23468--23525
31
1.9
30
89
3
89
37
22
6
32
1.81
26146--26208
8
8.6
8
86
10
75
0
14
0
85
0.59
26148--26216
14
4.9
13
83
13
84
0
14
1
84
0.70
26147--26208
7
8.7
7
89
10
83
0
14
0
85
0.60
26146--26226
36
2.2
38
89
10
123
1
13
2
82
0.83
26145--26226
28
2.8
28
85
10
103
1
13
2
82
0.82
34554--34868
115
2.7
115
96
0
569
31
14
22
31
1.94
38102--38833
76
9.6
76
94
0
1266
22
19
22
34
1.96
39025--39083
3
19.3
3
79
10
57
42
0
0
57
0.98
39570--39605
13
2.8
13
82
0
54
50
19
27
2
1.62
40394--40447
22
2.4
21
84
9
63
44
0
0
55
0.99
40406--40454
22
2.3
21
82
3
62
44
0
2
53
1.12
43217--43295
21
3.7
21
91
1
131
53
22
3
20
1.62
43217--43294
7
11.0
7
84
1
93
53
23
2
20
1.57
43806--43855
24
2.0
25
92
3
84
46
10
12
32
1.74
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
46747--46778
16
2.0
16
100
0
64
31
37
0
31
1.58
48989--49059
22
3.2
22
82
4
79
19
23
30
25
1.98
51956--51997
19
2.2
20
95
4
77
21
30
14
33
1.93

Tables:   1

The End!