Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003679.1 Hibiscus syriacus cultivar Beakdansim tig00007859_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27335

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1114--1332
29
7.7
29
72
7
164
22
24
16
36
1.94
2792--2834
21
2.2
20
84
16
54
62
6
6
23
1.45
7711--7783
35
2.1
35
97
0
137
27
6
8
57
1.53
13093--13147
27
2.0
27
85
0
74
41
12
5
40
1.66
15304--15385
43
1.9
43
82
5
103
48
7
23
20
1.74
16868--16902
18
1.9
18
100
0
70
20
5
17
57
1.60
16870--16910
18
2.3
18
91
0
64
21
9
12
56
1.65
16941--16980
20
2.1
19
90
4
62
20
2
17
60
1.48
17520--17573
20
2.8
19
86
5
81
31
31
16
20
1.95
19083--19125
10
4.4
10
82
5
52
48
0
0
51
1.00
25300--25369
29
2.4
29
97
2
133
14
15
5
64
1.47
25449--25498
6
8.7
6
91
8
86
18
36
0
46
1.49

Tables:   1

The End!