Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003685.1 Hibiscus syriacus cultivar Beakdansim tig00007873_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  59512

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4121--4160
20
2.0
20
90
4
64
55
7
0
37
1.29
5230--5256
14
1.9
14
100
0
54
48
0
7
44
1.31
6922--6959
18
2.1
19
90
5
60
57
5
0
36
1.21
9830--9863
10
3.4
10
95
0
59
55
17
5
20
1.62
10273--10305
12
2.8
12
95
0
57
39
15
15
30
1.88
10909--10956
23
2.1
23
84
0
60
14
18
41
25
1.88
15603--15640
18
2.2
17
90
4
58
47
0
7
44
1.32
30177--30237
19
3.2
19
70
11
52
24
31
27
16
1.96
32495--32579
27
3.3
27
70
21
92
41
2
28
28
1.68
32494--32592
49
2.0
49
98
0
189
40
2
31
26
1.67
37009--37060
24
2.1
25
89
3
79
36
0
0
63
0.95
37011--37073
13
4.9
13
77
16
60
41
0
0
58
0.98
39096--39143
24
2.0
24
84
8
62
29
18
31
20
1.97
42675--42720
13
3.5
13
90
0
74
36
19
10
32
1.87
42883--42919
2
18.5
2
100
0
74
48
0
0
51
1.00
57799--57942
76
1.9
76
81
9
177
40
9
5
45
1.59

Tables:   1

The End!