Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003686.1 Hibiscus syriacus cultivar Beakdansim tig00007874_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  101410

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11070--11131
13
4.9
13
76
13
58
59
0
0
40
0.97
15170--15202
12
2.8
12
95
0
57
30
15
15
39
1.88
15612--15645
10
3.4
10
95
0
59
20
5
17
55
1.62
18524--18563
20
2.0
20
90
4
64
37
0
5
57
1.21
20235--20261
14
1.9
14
100
0
54
44
7
0
48
1.31
21340--21379
20
2.0
20
90
4
64
37
0
7
55
1.29
22487--22526
21
2.0
20
85
5
53
40
17
15
27
1.89
36802--36852
21
2.5
20
90
6
75
29
23
7
39
1.83
37230--37281
22
2.5
21
75
9
54
26
30
15
26
1.96
37331--37434
42
2.5
42
84
6
131
29
32
10
26
1.90
37428--38427
498
2.0
498
96
0
1856
36
24
6
32
1.81
45182--45231
21
2.4
20
83
6
55
30
24
10
36
1.88
45697--45746
19
2.6
19
84
9
66
28
30
12
30
1.92
45697--45788
20
4.6
20
77
9
80
29
29
11
29
1.92
60212--60282
32
2.2
32
92
0
115
35
28
8
28
1.86
63412--63438
14
1.9
14
100
0
54
14
18
14
51
1.76
83428--83472
21
2.1
21
87
0
63
22
22
22
33
1.97
86532--86580
24
2.0
24
88
0
71
44
10
12
32
1.75
95065--95111
21
2.3
20
82
10
51
44
2
0
53
1.12
95061--95109
12
4.5
11
80
14
50
46
2
0
51
1.12
95293--95337
23
2.0
23
86
0
63
53
2
2
42
1.25
95439--95494
28
2.0
28
86
6
78
48
0
1
50
1.11
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
95432--95480
20
2.4
20
74
16
55
55
0
0
44
0.99
95470--95507
19
2.0
20
89
5
60
47
0
2
50
1.15
98449--98473
11
2.3
11
100
0
50
60
0
0
40
0.97
98871--98903
2
17.0
2
93
6
59
48
0
0
51
1.00

Tables:   1

The End!