Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003687.1 Hibiscus syriacus cultivar Beakdansim tig00007875_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  79902

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4992--5042
22
2.3
22
93
0
84
17
25
27
29
1.98
9865--10284
54
7.8
54
83
1
491
29
16
20
33
1.95
9861--10283
162
2.6
162
85
0
569
29
16
20
33
1.95
11119--11143
9
2.8
9
100
0
50
0
60
8
32
1.26
16256--16331
19
3.8
19
76
11
71
34
17
22
26
1.96
16371--16429
22
2.8
21
80
7
66
28
13
28
28
1.94
16732--17339
54
11.1
54
81
4
680
29
17
20
33
1.95
16870--16991
63
1.9
63
88
6
185
27
17
18
36
1.94
16730--17336
162
3.7
162
83
4
768
29
17
20
33
1.95
17463--17492
2
15.0
2
100
0
60
50
0
0
50
1.00
17877--17912
15
2.4
15
95
0
63
30
5
47
16
1.70
42173--42220
20
2.4
20
96
0
87
60
27
0
12
1.32
54855--54983
64
2.0
65
86
7
183
30
21
18
29
1.97
60803--60882
23
3.6
23
77
6
101
26
22
22
28
1.99
62842--62868
2
13.5
2
100
0
54
48
0
0
51
1.00
70100--70139
16
2.5
16
84
8
55
27
30
7
35
1.84
70306--70345
16
2.5
16
95
0
71
25
7
5
62
1.42
79051--79123
3
24.7
3
76
13
71
32
1
0
65
1.01
79067--79119
20
2.7
20
91
2
81
30
0
0
69
0.88
79082--79130
25
2.0
25
84
8
64
34
0
0
65
0.93
79577--79609
6
5.5
6
96
0
57
54
12
33
0
1.37

Tables:   1

The End!