Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003692.1 Hibiscus syriacus cultivar Beakdansim tig00007889_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  72877

Tables:   1   

This is table  1  of  1  ( 35 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
919--1049
59
2.2
59
82
9
151
29
16
16
37
1.91
1466--1494
2
15.0
2
92
7
51
51
0
0
48
1.00
1834--1890
23
2.5
23
88
5
80
49
0
0
50
1.00
1834--1894
22
2.7
22
82
5
68
47
0
0
52
1.00
3229--3266
20
1.9
20
84
10
51
50
15
5
28
1.66
7586--7643
28
2.1
28
87
3
82
37
10
10
41
1.73
7726--7823
28
3.4
29
84
5
119
38
11
9
40
1.73
12213--12253
16
2.6
16
82
17
50
17
9
17
56
1.67
12376--12414
20
2.0
20
90
10
62
28
30
15
25
1.96
13404--13446
23
2.0
23
86
13
65
55
0
30
13
1.39
13857--13900
23
1.9
23
95
0
79
38
18
20
22
1.93
13954--14013
27
2.2
27
75
21
63
33
11
21
33
1.90
15645--15725
20
4.2
20
76
21
75
55
1
1
41
1.15
15714--15782
23
3.0
23
74
14
63
46
0
4
49
1.21
16854--16934
30
2.6
32
78
7
87
37
6
13
43
1.69
20970--21022
26
2.1
25
82
10
63
54
0
0
45
0.99
20974--21022
24
2.0
24
84
11
64
53
0
0
46
1.00
21030--21058
13
2.1
14
93
6
51
41
0
0
58
0.98
21083--21171
34
2.6
35
77
11
105
53
1
1
43
1.15
21083--21183
33
3.1
31
72
16
87
51
1
0
45
1.19
21213--21242
14
2.1
14
93
0
51
53
3
0
43
1.17
21380--21424
23
2.0
23
86
0
63
46
0
4
48
1.22
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
25704--25779
30
2.5
30
80
8
82
21
17
10
51
1.74
32782--32833
20
2.6
21
84
9
72
26
25
21
26
1.99
36369--36419
26
2.0
26
100
0
102
56
15
3
23
1.56
44374--44403
2
15.0
2
100
0
60
50
0
0
50
1.00
48121--48273
72
2.2
72
84
7
197
35
11
7
45
1.69
54995--55035
20
2.0
20
85
0
55
51
2
2
43
1.28
62503--62545
12
3.8
12
78
12
54
48
16
16
18
1.81
63349--63396
22
2.2
22
84
0
60
25
25
20
29
1.99
63530--63583
28
1.9
28
88
0
81
16
31
9
42
1.80
64682--64740
30
1.9
31
93
3
102
38
22
6
32
1.80
67265--67306
2
22.0
2
90
9
70
50
0
0
50
1.00
69010--69101
41
2.2
41
81
11
107
25
22
4
47
1.69
71152--71198
22
2.2
21
84
3
58
40
6
4
48
1.48

Tables:   1

The End!