Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003698.1 Hibiscus syriacus cultivar Beakdansim tig00007907_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  163610

Tables:   1   

This is table  1  of  1  ( 47 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7902--8354
181
2.4
187
83
6
542
32
15
19
32
1.93
10203--10240
2
19.5
2
94
5
69
50
0
0
50
1.00
11037--11069
3
11.0
3
100
0
66
66
0
0
33
0.92
15078--15103
4
6.5
4
100
0
52
23
0
0
76
0.78
30702--30757
16
3.6
16
74
13
62
48
5
3
42
1.43
30701--30766
31
2.2
30
91
2
105
46
6
4
42
1.48
31730--31771
22
1.9
22
95
0
75
52
0
2
45
1.13
31720--31833
57
2.0
57
98
0
219
44
5
4
45
1.46
46270--46345
31
2.4
31
77
2
80
17
26
26
30
1.97
46898--46941
22
2.1
21
87
8
63
34
6
6
52
1.55
48483--48524
22
1.9
22
85
0
57
23
4
2
69
1.20
51563--51621
2
29.5
2
100
0
118
50
0
0
49
1.00
51932--51975
2
22.5
2
86
4
63
43
0
0
56
0.99
57375--57401
3
9.0
3
100
0
54
66
0
0
33
0.92
61093--61146
28
1.9
26
82
14
63
3
27
18
50
1.64
63603--63629
2
13.5
2
100
0
54
48
0
0
51
1.00
63791--63939
12
11.6
12
68
25
67
36
1
0
61
1.04
63785--63951
82
2.0
82
98
1
327
38
2
0
58
1.11
63791--63943
38
3.9
38
89
10
245
36
1
0
62
1.04
64181--64218
20
2.0
19
90
10
60
47
10
23
18
1.79
68564--68630
2
33.5
2
100
0
134
49
0
0
50
1.00
74371--74533
82
2.0
80
82
13
201
49
4
2
43
1.35
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
74491--74543
19
2.7
20
74
11
56
62
1
0
35
1.06
85274--85479
102
2.0
102
99
0
403
39
4
13
42
1.65
85314--85472
51
3.1
51
62
13
119
39
4
13
42
1.65
94463--94511
21
2.4
22
83
10
59
26
6
12
55
1.60
100029--100054
10
2.6
10
100
0
52
69
0
0
30
0.89
102129--102160
2
16.0
2
100
0
64
0
50
0
50
1.00
102160--102192
2
16.5
2
100
0
66
48
0
0
51
1.00
103889--103948
31
1.9
31
90
6
95
20
43
16
20
1.88
106448--106538
24
3.8
24
82
2
94
27
17
17
37
1.92
106469--106526
23
2.5
24
91
2
91
24
15
22
37
1.93
106616--106688
35
2.1
35
94
0
128
10
27
28
32
1.91
113107--113140
16
2.1
16
94
0
59
32
26
8
32
1.87
113568--113639
37
2.0
36
89
5
110
48
15
4
31
1.64
114553--114577
9
2.8
9
100
0
50
12
0
0
88
0.53
124262--124328
21
3.2
21
95
0
116
35
35
13
14
1.86
125343--125475
66
2.0
66
94
0
230
36
10
11
41
1.75
126912--126961
24
2.0
24
84
3
64
36
12
6
46
1.66
141968--142088
31
4.0
31
84
6
149
22
19
20
38
1.94
142773--142812
19
2.0
20
90
4
64
37
17
10
35
1.83
145888--145914
5
5.4
5
100
0
54
81
0
0
18
0.69
151472--151504
15
2.1
16
88
5
50
9
24
15
51
1.72
152254--152288
16
2.1
17
94
5
63
34
25
8
31
1.86
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
154997--155068
31
2.3
30
75
11
74
38
18
6
36
1.77
157820--157868
20
2.5
19
83
9
62
26
0
4
69
1.06
160811--160863
27
2.0
27
96
0
97
50
13
15
20
1.76

Tables:   1

The End!