Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003708.1 Hibiscus syriacus cultivar Beakdansim tig00007934_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  97812

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
19074--19226
79
1.9
79
86
0
216
49
13
13
24
1.77
20974--21052
32
2.4
32
89
2
113
31
11
13
43
1.80
21044--21099
27
2.1
27
93
0
94
28
10
14
46
1.78
22600--22643
18
2.5
17
81
3
52
38
4
29
27
1.76
23033--23594
261
2.2
251
83
11
745
41
19
12
27
1.87
24750--24811
31
2.0
31
87
0
88
41
17
14
25
1.88
25034--25093
20
3.0
20
92
0
102
35
38
3
23
1.71
44719--45693
484
2.0
488
96
3
1808
30
21
16
31
1.95
48799--48851
27
2.0
27
92
0
88
32
7
22
37
1.82
54450--54487
20
1.9
20
94
0
67
26
23
5
44
1.74
57881--57928
20
2.5
20
86
3
62
35
0
22
41
1.54
59718--59755
20
1.9
20
100
0
76
26
21
5
47
1.71
61184--61253
20
3.3
20
83
11
95
45
5
4
44
1.47
67460--67490
15
2.1
15
100
0
62
22
19
19
38
1.93
71028--71067
20
2.0
21
90
5
64
32
0
27
40
1.57
71033--71078
20
2.3
20
85
3
58
39
0
23
36
1.55
76875--76902
13
2.2
13
100
0
56
50
10
0
39
1.37
82274--82357
20
4.2
20
81
0
96
42
19
14
23
1.87
90672--90704
13
2.6
13
90
4
50
54
0
0
45
0.99

Tables:   1

The End!