Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003709.1 Hibiscus syriacus cultivar Beakdansim tig00007935_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61070

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7195--7234
20
1.9
22
85
10
57
32
12
22
32
1.91
17348--17377
2
15.0
2
100
0
60
50
0
0
50
1.00
17383--17433
26
2.0
26
84
7
68
41
3
1
52
1.31
19920--19958
21
1.9
21
89
5
62
17
20
23
38
1.93
19929--20033
49
2.1
50
84
6
135
17
24
27
30
1.97
19943--20037
19
4.9
19
80
12
104
15
25
29
29
1.96
20000--20039
9
4.3
9
84
6
53
15
30
30
25
1.95
20035--20090
17
3.3
17
100
0
112
17
46
23
12
1.82
26569--26607
21
1.9
21
89
5
62
17
25
23
33
1.96
26569--26667
20
5.1
19
75
15
76
18
26
25
30
1.98
26589--26667
19
4.1
20
74
11
74
17
26
26
29
1.98
26570--26669
10
10.3
9
73
14
65
17
28
25
30
1.97
26666--26718
5
9.8
5
76
15
52
18
50
22
7
1.72
26665--26725
17
3.3
17
77
20
68
18
49
22
9
1.77
26666--26731
22
2.9
22
95
4
114
18
46
24
10
1.80
41299--41344
5
8.5
6
92
7
57
30
52
17
0
1.45
41837--41863
6
4.5
6
100
0
54
0
14
51
33
1.43
41867--42040
41
4.2
41
90
1
242
35
22
21
20
1.96
41930--42036
21
5.2
21
64
4
74
33
23
19
23
1.97
41867--42045
21
8.7
21
63
9
73
35
22
21
20
1.96
41899--42057
41
3.9
41
87
4
196
33
22
20
23
1.97
42182--42239
3
19.0
3
82
3
71
36
0
1
62
1.06
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
50592--50628
15
2.5
15
95
0
65
16
29
24
29
1.96

Tables:   1

The End!