Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000371.1 Hibiscus syriacus cultivar Beakdansim tig00000673_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  55215

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2555--2588
15
2.3
15
94
0
59
44
20
26
8
1.81
6447--6501
2
28.0
2
96
3
103
49
0
0
50
1.00
8353--8517
76
2.2
75
86
3
233
30
2
10
56
1.46
8475--8537
19
3.2
19
75
4
54
31
0
12
55
1.37
9034--9067
16
2.1
16
94
0
59
23
0
2
73
0.97
9041--9075
16
2.2
16
89
0
52
22
2
0
74
0.95
9032--9081
18
2.9
17
82
11
66
20
2
2
76
0.99
15914--16145
69
3.4
67
75
10
191
31
20
24
23
1.98
17081--17559
76
6.3
76
84
1
593
29
11
18
40
1.85
17426--17687
134
2.0
134
86
1
364
28
10
20
40
1.85
17560--17819
76
3.4
76
89
1
396
26
9
22
41
1.84
17350--17769
210
2.0
210
86
2
594
28
10
20
40
1.85
17697--17811
25
4.6
25
68
15
76
26
9
24
40
1.85
17274--17823
286
1.9
285
89
1
850
28
10
20
41
1.84
20620--20689
26
2.7
26
95
0
122
15
11
0
72
1.11
34218--34256
20
2.0
20
84
0
51
30
12
23
33
1.92
45922--45960
20
2.0
20
89
0
60
33
23
10
33
1.88

Tables:   1

The End!