Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003710.1 Hibiscus syriacus cultivar Beakdansim tig00007936_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  69710

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15725--15787
32
2.0
32
87
0
90
31
20
15
31
1.94
16515--16859
20
17.0
20
73
10
166
35
23
11
29
1.91
16853--16903
20
2.5
20
80
6
57
25
11
29
33
1.91
18437--18496
28
2.1
29
87
3
86
36
6
6
50
1.55
20552--20585
17
2.1
16
88
5
50
38
11
5
44
1.65
21347--21405
31
1.9
31
92
0
100
42
5
8
44
1.57
21428--21894
22
21.6
22
82
7
491
48
9
0
41
1.38
21428--21894
44
10.8
44
84
6
587
48
9
0
41
1.38
21445--21897
66
7.0
65
85
8
620
47
9
0
42
1.38
21878--21908
12
2.6
12
89
0
53
48
0
0
51
1.00
21856--21920
22
2.9
23
78
10
55
49
3
1
46
1.27
22534--22593
13
4.8
13
76
15
72
26
0
1
71
0.95
22534--22598
21
3.3
20
73
20
66
26
0
1
72
0.94
22536--22598
29
2.2
29
83
11
76
25
0
1
73
0.93
22538--22580
16
2.7
16
88
0
59
25
0
2
72
0.97
22849--22887
12
3.1
12
85
7
51
76
0
0
23
0.78
22846--22914
33
2.1
32
89
2
102
73
4
0
21
1.00
22850--22893
13
3.5
12
87
6
61
75
2
0
22
0.92
43020--43050
2
15.5
2
100
0
62
51
0
0
48
1.00
50064--50094
16
1.9
16
93
0
53
64
6
0
29
1.18
58401--58454
21
2.6
21
90
0
81
31
29
0
38
1.57
58425--58632
78
2.7
78
80
4
244
28
36
2
33
1.70
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
61718--61766
21
2.3
22
74
22
59
59
14
10
16
1.61
62497--62551
28
2.0
28
92
0
92
38
18
21
21
1.94
66580--66636
11
5.4
11
72
8
55
68
1
0
29
1.00
67797--67825
13
2.2
13
100
0
58
48
0
0
51
1.00

Tables:   1

The End!