Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003715.1 Hibiscus syriacus cultivar Beakdansim tig00007945_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  98902

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3552--3590
20
2.0
20
94
0
69
58
2
0
38
1.12
12324--12353
7
4.3
7
100
0
60
13
0
26
60
1.34
14253--14282
15
2.1
15
93
6
53
33
0
13
53
1.40
15283--15313
3
10.3
3
100
0
62
35
0
0
64
0.94
15702--15736
2
17.5
2
100
0
70
48
0
0
51
1.00
15785--15844
26
2.3
26
80
13
70
41
0
5
53
1.23
19498--19523
5
5.2
5
100
0
52
57
0
0
42
0.98
24544--24579
13
2.7
14
87
12
58
47
0
0
52
1.00
24544--24582
14
2.7
15
92
7
64
46
0
0
53
1.00
24544--24579
2
19.0
2
88
11
58
47
0
0
52
1.00
27021--27060
22
1.9
20
90
10
62
47
0
12
40
1.41
36170--36231
31
2.0
31
81
9
72
40
32
1
25
1.66
36864--36889
2
13.0
2
100
0
52
50
0
0
50
1.00
42577--42651
38
2.0
38
84
5
98
48
1
4
46
1.29
44250--44281
3
10.7
3
100
0
64
31
0
0
68
0.90
49504--49591
31
2.8
31
73
0
86
31
21
11
35
1.89
49695--49764
31
2.3
31
89
0
104
37
18
10
34
1.84
61491--61524
3
11.3
3
100
0
68
67
0
32
0
0.91
79222--79261
20
1.9
22
85
10
57
32
12
22
32
1.91
91993--92031
21
1.9
21
89
5
62
17
20
23
38
1.93
92002--92106
49
2.1
50
84
6
135
17
24
27
30
1.97
92016--92110
19
4.9
19
80
12
104
15
25
29
29
1.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
92073--92112
9
4.3
9
84
6
53
15
30
30
25
1.95
92108--92163
17
3.3
17
100
0
112
17
46
23
12
1.82
98586--98642
29
1.9
29
92
3
96
17
26
22
33
1.96
98629--98666
17
2.1
19
85
9
53
18
18
31
31
1.95
98668--98720
19
2.8
19
88
8
74
18
47
24
9
1.78
98681--98726
24
1.9
24
91
8
76
19
43
26
10
1.84

Tables:   1

The End!