Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003717.1 Hibiscus syriacus cultivar Beakdansim tig00007947_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  56870

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
622--690
15
4.7
16
66
18
51
50
1
13
34
1.50
618--717
43
2.3
43
98
0
191
50
2
13
35
1.53
644--713
23
3.2
23
66
24
60
50
2
11
35
1.53
1867--1971
37
2.8
38
89
4
160
26
25
12
35
1.92
13446--13556
53
2.0
52
83
14
136
33
4
10
51
1.57
20255--20301
2
23.5
2
100
0
94
51
0
0
48
1.00
37148--37387
59
4.1
59
81
0
264
33
25
12
28
1.93
37989--38134
40
3.7
40
90
0
211
36
28
13
22
1.91
38456--38504
24
2.0
24
96
0
89
44
12
10
32
1.75
39037--39107
30
2.3
31
80
2
81
40
19
5
33
1.75
43048--43086
20
2.0
20
85
10
53
33
0
28
38
1.57
47003--47163
59
2.7
59
79
8
166
44
4
15
35
1.68
49146--49293
39
3.8
39
77
7
156
20
25
22
31
1.98
49129--49298
78
2.2
78
86
3
236
19
26
22
31
1.98
49935--49989
27
2.0
27
100
0
110
21
14
25
38
1.92
51099--51180
16
5.1
16
77
5
58
34
3
19
42
1.69
51100--51138
20
2.0
20
89
0
60
28
2
20
48
1.62
51110--51181
28
2.6
28
79
0
90
33
4
20
41
1.72
51252--51288
2
18.5
2
100
0
74
51
0
0
48
1.00
51402--51487
4
21.5
4
70
13
52
46
17
4
31
1.68
51404--51428
13
1.9
13
100
0
50
52
24
0
24
1.48
55971--56020
20
2.5
20
87
6
66
32
18
16
34
1.92

Tables:   1

The End!