Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000372.1 Hibiscus syriacus cultivar Beakdansim tig00000679_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  63166

Tables:   1   

This is table  1  of  1  ( 32 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4499--4542
21
2.1
21
87
4
63
77
4
4
13
1.08
4499--4550
14
3.7
13
84
7
59
76
3
3
15
1.07
4574--4893
38
8.4
37
79
17
336
42
7
4
45
1.52
4575--4904
115
2.9
113
85
10
431
42
7
3
45
1.51
8372--8404
2
16.5
2
100
0
66
51
0
0
48
1.00
9549--9580
15
2.0
17
88
11
50
43
0
0
56
0.99
13694--13745
21
2.5
21
71
6
52
46
11
13
28
1.78
19048--19078
16
1.9
16
93
0
53
6
29
0
64
1.18
24044--24103
13
4.6
13
87
0
66
36
11
16
35
1.85
23902--24086
85
2.2
84
79
3
185
30
15
18
35
1.92
24036--24091
26
2.2
26
83
0
67
37
10
19
32
1.86
27940--28129
75
2.5
76
84
3
249
21
24
32
22
1.98
28091--28134
23
2.0
22
91
8
72
13
18
40
27
1.88
30694--30780
22
4.0
21
77
5
77
14
25
37
21
1.92
34586--34625
21
1.9
21
85
10
55
35
10
2
52
1.48
36546--36584
21
2.0
20
85
10
53
12
20
43
23
1.86
36545--36734
75
2.5
76
83
6
244
21
23
32
23
1.98
36696--36739
23
2.0
22
91
8
72
13
18
40
27
1.88
37456--37503
13
3.7
13
88
5
71
29
18
18
33
1.95
37482--37646
85
1.9
85
91
0
267
30
19
17
32
1.95
43240--43291
22
2.4
22
86
0
68
51
7
5
34
1.54
47941--48235
49
6.0
49
88
2
421
25
21
14
38
1.91
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
50118--50172
23
2.5
21
91
5
83
25
18
23
32
1.97
50118--50172
21
2.5
22
88
5
76
25
18
23
32
1.97
51725--51772
19
2.5
20
86
3
62
31
14
6
47
1.69
52286--52333
13
3.7
13
97
0
87
29
20
16
33
1.95
52312--52472
83
1.9
83
93
0
277
30
21
17
31
1.96
52574--52598
2
12.5
2
100
0
50
52
0
0
48
1.00
58060--58111
22
2.4
22
86
0
68
51
7
5
34
1.54
61852--61880
14
2.1
14
100
0
58
24
34
0
41
1.55
62744--62937
48
4.0
49
88
4
286
24
22
15
38
1.92
62747--62932
97
1.9
97
90
2
293
24
22
15
38
1.92

Tables:   1

The End!