Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003721.1 Hibiscus syriacus cultivar Beakdansim tig00007959_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25434

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1062--1108
14
3.6
14
80
16
64
46
17
0
36
1.48
1062--1118
25
2.5
22
86
11
71
49
14
0
36
1.43
1062--1129
21
3.0
22
79
12
59
50
11
0
38
1.39
1080--1757
47
13.3
49
81
15
776
46
12
0
40
1.43
1129--1874
47
14.1
55
77
20
643
46
12
0
40
1.44
1334--1368
10
3.4
11
92
7
56
45
17
0
37
1.48
1446--1757
48
6.4
48
91
6
452
46
12
0
41
1.42
1583--1654
21
3.2
21
64
17
54
45
11
0
43
1.39
1446--1817
96
3.7
97
87
10
466
46
12
0
41
1.41
1741--1828
21
4.3
21
67
18
60
45
13
0
40
1.44
4672--4724
25
2.1
25
96
0
97
56
13
0
30
1.37
5413--5543
28
4.5
28
73
9
111
16
24
35
23
1.95
17871--17955
2
42.5
2
100
0
170
50
0
0
49
1.00
18317--18349
3
11.0
3
93
0
57
63
0
3
33
1.10
22872--22910
15
2.6
15
88
11
62
17
0
0
82
0.68
22878--22912
18
1.9
17
88
11
52
17
0
0
82
0.66

Tables:   1

The End!