Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003722.1 Hibiscus syriacus cultivar Beakdansim tig00007960_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  49250

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5086--5125
20
2.0
21
90
5
64
40
27
0
32
1.57
7977--8046
31
2.3
31
79
0
77
12
28
30
28
1.93
14500--14545
20
2.3
20
85
3
58
39
23
0
36
1.55
17913--17950
20
1.9
20
94
0
67
44
5
23
26
1.74
21750--21779
2
15.0
2
100
0
60
50
0
0
50
1.00
23319--23359
20
2.0
20
95
0
73
43
2
19
34
1.64
23624--23676
27
2.0
27
92
0
88
33
22
11
32
1.90
40491--40540
12
4.1
12
74
23
50
66
10
10
14
1.46
46998--47057
20
3.0
20
92
0
102
23
3
38
35
1.71
47277--47338
31
2.0
31
87
0
88
25
14
17
41
1.88
48505--49023
252
2.0
253
84
9
662
26
13
20
40
1.89

Tables:   1

The End!