Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003723.1 Hibiscus syriacus cultivar Beakdansim tig00007964_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  62260

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8287--8353
34
2.0
33
83
11
84
50
4
0
44
1.22
9791--9832
21
2.0
20
86
4
57
38
14
7
40
1.73
9834--9872
20
2.0
20
100
0
78
41
10
10
38
1.73
14403--14468
23
2.9
23
90
4
107
33
21
12
33
1.90
24669--24698
3
10.0
3
100
0
60
0
0
33
66
0.92
25910--25977
32
2.1
32
86
0
91
30
5
41
22
1.77
28254--28293
2
20.0
2
100
0
80
50
0
0
50
1.00
28562--28622
20
3.2
20
67
21
58
27
0
16
55
1.41
28540--28623
37
2.3
37
97
0
159
29
0
15
54
1.41
28545--28602
17
3.2
17
69
21
55
31
0
13
55
1.39
30966--31000
4
8.2
4
93
3
52
25
48
2
22
1.64
37378--37426
20
2.5
20
86
3
64
30
12
4
53
1.57
47122--47280
64
2.5
65
84
7
191
34
18
20
26
1.96
47772--47806
18
1.9
18
88
11
54
54
5
17
22
1.64
51034--51194
64
2.5
65
86
7
204
33
18
21
26
1.96
51668--51702
18
1.9
18
88
11
54
54
5
17
22
1.64
53364--53401
20
1.9
20
88
0
58
26
36
26
10
1.89

Tables:   1

The End!