Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003725.1 Hibiscus syriacus cultivar Beakdansim tig00007966_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  75489

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5996--6043
20
2.5
20
86
3
62
35
2
25
37
1.68
9269--9303
2
18.0
2
94
5
63
48
0
0
51
1.00
9548--9582
16
2.2
16
90
5
54
14
22
0
62
1.31
11146--11192
20
2.4
20
89
3
69
36
0
21
42
1.53
14648--14708
2
31.0
2
96
3
115
49
0
0
50
1.00
19731--19756
2
13.0
2
100
0
52
50
0
0
50
1.00
20000--20034
16
2.2
16
94
0
61
14
20
0
65
1.26
21597--21644
20
2.5
20
89
3
71
35
0
25
39
1.56
24696--24732
16
2.4
16
90
4
58
13
24
0
62
1.31
26295--26342
20
2.5
20
89
3
71
35
0
25
39
1.56
28622--28666
19
2.4
19
92
0
72
17
22
28
31
1.97
28623--28666
9
4.6
10
77
11
56
15
22
29
31
1.95
28669--28732
13
4.5
13
80
17
74
15
48
21
14
1.80
28669--28743
31
2.4
31
97
0
141
16
48
21
14
1.81
28679--28743
18
3.9
18
80
19
95
16
49
21
12
1.79
28751--28826
29
2.6
29
87
0
98
21
9
27
42
1.83
41641--41702
31
2.0
31
93
0
106
41
16
14
27
1.87
44466--44584
38
3.3
36
73
11
109
36
21
17
23
1.94
63586--63638
26
2.0
26
82
13
65
39
16
16
26
1.91
73834--73986
79
1.9
79
86
0
216
49
13
13
24
1.77

Tables:   1

The End!