Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003728.1 Hibiscus syriacus cultivar Beakdansim tig00007972_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  111283

Tables:   1   

This is table  1  of  1  ( 37 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13477--13600
59
2.1
58
81
3
140
38
15
12
33
1.84
13807--13925
60
2.0
59
85
1
157
36
18
17
27
1.94
18030--18175
21
6.7
21
78
10
132
19
55
4
20
1.61
18074--18203
47
2.7
47
84
7
181
18
59
4
17
1.54
18095--18229
27
5.4
26
75
14
106
18
60
5
15
1.53
18114--18202
24
3.7
24
73
19
87
17
60
3
17
1.49
18034--18268
21
10.4
21
70
19
77
17
57
5
19
1.59
18252--18291
21
1.9
21
84
0
53
22
47
10
20
1.79
34226--34263
20
1.9
20
89
10
60
52
0
0
47
1.00
34232--34292
29
2.1
29
81
6
70
57
0
3
39
1.15
34719--34755
19
2.0
19
89
5
58
56
0
0
43
0.99
35151--35210
17
3.9
17
77
18
60
70
0
1
28
0.97
38468--38503
6
6.0
6
86
0
54
38
0
0
61
0.96
38464--38502
12
3.2
12
100
0
78
38
0
0
61
0.96
47493--47600
31
3.5
31
94
0
189
39
10
15
34
1.81
48191--48236
21
2.4
18
74
19
56
36
10
13
39
1.79
48196--48236
21
2.0
21
95
0
73
34
9
14
41
1.79
55077--55109
15
2.2
15
94
0
57
18
21
24
36
1.95
56409--56988
287
2.0
288
95
1
1047
39
20
13
26
1.90
63156--63504
182
1.9
182
84
3
470
45
9
6
38
1.61
65336--65460
61
2.0
61
100
0
250
19
9
16
55
1.68
65561--65589
14
2.1
14
100
0
58
41
0
6
51
1.28
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
66078--66215
36
3.8
36
97
0
258
39
17
10
32
1.84
66790--66899
55
2.0
55
100
0
220
34
9
12
43
1.74
67735--67770
14
2.5
14
90
4
54
19
8
0
72
1.10
70605--70629
10
2.5
10
100
0
50
8
52
0
40
1.31
74290--74373
40
2.1
40
93
0
141
17
45
15
21
1.85
82387--82460
13
5.4
14
75
20
59
60
1
0
37
1.05
82402--82478
26
3.0
26
80
3
75
59
2
1
36
1.19
82387--82460
7
10.7
7
73
22
59
60
1
0
37
1.05
85044--85081
19
2.1
19
85
5
51
39
5
0
55
1.23
85218--85269
16
3.2
16
88
0
77
13
15
26
44
1.84
87775--87808
12
2.8
12
86
4
50
8
14
0
76
1.01
89642--89705
33
1.9
33
93
0
110
25
18
15
40
1.90
95797--95831
15
2.3
15
90
0
52
22
25
28
22
1.99
109368--109425
24
2.4
25
85
2
73
27
5
0
67
1.12
109369--109426
12
4.7
13
72
12
50
25
5
0
68
1.10

Tables:   1

The End!