Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000373.1 Hibiscus syriacus cultivar Beakdansim tig00000681_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  59859

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7201--7254
21
2.9
17
80
20
63
37
9
16
37
1.81
7892--7944
20
2.7
20
93
0
88
16
22
22
37
1.94
8202--8269
14
5.3
13
73
15
61
39
1
1
57
1.17
8201--8261
18
3.2
18
75
24
63
37
1
1
59
1.17
8239--8268
15
2.1
14
93
6
51
46
0
0
53
1.00
15480--15506
2
13.5
2
100
0
54
51
0
0
48
1.00
20798--20904
3
35.7
3
96
0
142
32
7
0
59
1.25
24248--24299
23
2.2
24
89
3
79
32
25
17
25
1.97
28743--28822
21
3.8
21
77
9
72
16
25
35
23
1.95
28764--28824
20
2.9
20
82
7
68
18
26
32
22
1.97
32637--32676
21
1.9
21
85
10
55
35
10
2
52
1.48
35688--35739
24
2.0
27
82
10
65
19
11
11
57
1.63
36532--36587
22
2.5
23
91
8
98
23
28
14
33
1.94
36701--36732
14
2.3
14
100
0
64
34
21
0
43
1.53
41735--41792
6
9.7
6
98
0
107
53
0
46
0
1.00
43592--43633
19
2.3
18
80
15
50
33
4
0
61
1.17
44409--44459
15
3.3
15
76
15
50
37
1
7
52
1.42
45446--45487
14
3.1
15
83
16
56
40
7
14
38
1.73
45463--45563
38
2.7
37
90
4
157
40
5
11
41
1.66
45583--45643
2
30.5
2
96
0
113
50
1
0
47
1.10

Tables:   1

The End!