Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003730.1 Hibiscus syriacus cultivar Beakdansim tig00007974_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  45329

Tables:   1   

This is table  1  of  1  ( 33 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1371--1441
30
2.3
31
90
4
117
39
5
12
42
1.67
5573--5699
45
3.0
40
79
16
125
33
27
3
36
1.73
15491--15524
3
11.3
3
87
12
52
32
0
0
67
0.91
15489--15518
15
2.0
15
100
0
60
33
0
0
66
0.92
17883--17993
58
1.9
58
81
7
136
37
11
10
39
1.77
27937--27970
9
3.6
9
88
11
50
55
0
2
41
1.15
28506--28536
16
1.9
16
93
0
53
61
3
0
35
1.12
29161--29208
19
2.4
20
86
6
62
41
0
0
58
0.98
30480--30514
2
17.5
2
100
0
70
48
0
0
51
1.00
30691--30799
40
2.8
40
87
1
148
59
7
3
29
1.42
38262--38296
18
1.9
19
88
11
56
37
17
11
34
1.85
38749--38958
20
10.5
20
85
5
246
36
26
17
20
1.94
38670--38939
60
4.5
59
81
5
195
37
26
17
18
1.93
39651--39697
24
2.0
24
87
8
69
25
14
21
38
1.92
39872--39896
12
2.1
12
100
0
50
72
0
28
0
0.86
42179--42430
33
7.2
33
83
10
247
46
17
22
13
1.83
42193--42454
19
14.7
19
79
17
312
45
17
22
14
1.84
42223--42454
53
4.3
52
86
8
281
45
16
23
14
1.84
42356--42410
14
3.6
14
73
21
56
45
20
23
10
1.82
42179--42448
86
3.1
86
92
5
459
46
17
22
13
1.83
42425--42540
53
2.2
52
86
3
160
18
23
18
38
1.93
42463--42550
19
4.8
19
82
14
123
13
22
15
47
1.81
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
42641--42677
14
2.6
14
91
0
65
45
21
0
32
1.52
44623--44779
19
8.8
19
75
13
136
47
24
19
8
1.76
44623--44743
52
2.2
52
88
7
170
47
25
19
7
1.75
44701--44757
14
3.7
14
72
20
51
45
26
21
7
1.77
44682--44774
33
2.8
33
90
0
150
48
23
19
8
1.76
44641--44779
52
2.7
52
73
18
144
47
24
20
7
1.76
44775--44852
19
4.4
19
81
15
103
7
16
28
47
1.74
44791--44817
14
1.9
14
100
0
54
7
14
29
48
1.71
44775--44884
52
2.1
53
84
1
141
9
16
26
48
1.76
44932--45204
93
3.1
87
90
6
324
44
19
13
23
1.85
44982--45204
93
2.4
93
99
0
437
44
18
13
22
1.85

Tables:   1

The End!