Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003732.1 Hibiscus syriacus cultivar Beakdansim tig00007980_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  92367

Tables:   1   

This is table  1  of  1  ( 29 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7905--7941
2
18.5
2
100
0
74
51
0
0
48
1.00
8659--8688
15
2.0
15
93
0
51
13
3
0
83
0.77
9758--9824
2
33.5
2
100
0
134
49
0
0
50
1.00
17901--17932
9
3.6
9
95
0
55
15
21
12
50
1.77
21016--21056
21
2.0
21
85
9
57
70
2
0
26
0.99
21329--21387
29
2.0
30
83
9
77
38
5
28
27
1.78
24916--24941
2
13.0
2
100
0
52
50
0
0
50
1.00
27013--27090
31
2.5
31
85
0
102
35
10
25
28
1.89
27658--27701
21
2.1
21
86
0
61
34
9
4
52
1.54
27727--27792
21
3.2
21
70
8
64
59
10
10
19
1.60
28352--28410
31
1.9
31
92
0
100
23
18
16
40
1.91
28346--28417
31
2.3
31
82
0
99
23
26
13
36
1.93
29409--29450
19
2.2
19
100
0
84
47
11
9
30
1.72
32597--32672
38
2.0
38
92
5
127
55
10
14
19
1.68
32904--32944
13
3.1
13
86
6
55
63
2
0
34
1.08
32900--32942
14
3.2
14
80
9
54
62
2
0
34
1.08
44957--45007
18
2.9
17
75
19
52
64
0
1
33
1.05
46155--46201
19
2.5
19
96
0
85
44
10
12
31
1.77
50219--50262
9
4.9
9
78
10
54
29
31
13
25
1.94
50214--50274
27
2.3
27
97
0
113
29
29
16
24
1.96
53464--53522
26
2.1
29
84
9
79
42
8
0
49
1.33
59009--59046
20
1.9
19
85
15
51
7
31
7
52
1.59
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
63971--64020
14
3.6
14
80
0
64
24
2
24
50
1.60
63962--64030
28
2.4
28
80
4
75
18
2
28
49
1.62
69995--70034
21
1.9
21
89
0
62
20
22
15
42
1.88
71000--71034
16
2.1
17
89
5
54
25
0
2
71
1.00
75074--75382
166
1.9
163
83
6
399
32
16
15
36
1.90
75074--75385
83
3.8
80
77
11
301
32
16
15
36
1.90
75585--75632
16
3.0
16
74
20
55
41
20
2
35
1.64

Tables:   1

The End!