Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003737.1 Hibiscus syriacus cultivar Beakdansim tig00007996_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61133

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1513--1543
2
15.5
2
100
0
62
48
0
0
51
1.00
4113--4144
13
2.5
13
100
0
64
56
6
6
31
1.49
6971--7841
259
3.4
260
87
7
1162
28
12
18
40
1.87
8487--8557
35
2.0
35
94
0
124
50
12
0
36
1.41
8490--8552
17
3.7
16
71
21
56
50
11
0
38
1.38
13599--13651
20
2.8
18
83
13
54
54
0
0
45
0.99
13599--13637
20
2.0
20
89
0
60
53
0
0
46
1.00
15513--15626
24
4.8
24
86
2
158
57
20
12
9
1.62
16420--16484
31
2.1
31
82
0
76
24
27
9
38
1.86
16759--16808
3
16.7
3
100
0
100
66
0
0
34
0.92
18197--18271
38
2.0
37
85
10
100
46
0
2
50
1.15
36727--36783
28
2.0
29
82
3
71
33
19
17
29
1.95
36896--36943
19
2.5
19
96
0
87
41
0
6
52
1.27
38117--38221
47
2.3
47
83
5
124
25
12
16
45
1.82
38157--38221
23
2.8
24
77
15
64
23
13
16
46
1.83
39927--39976
24
2.0
25
88
11
75
56
24
10
10
1.63
41018--41079
21
3.0
20
72
9
63
35
4
0
59
1.19
46895--46922
2
14.0
2
100
0
56
0
50
0
50
1.00
55718--55776
31
1.9
31
92
0
100
27
16
20
35
1.94
59339--59377
18
2.1
19
85
4
53
58
5
5
30
1.41

Tables:   1

The End!