Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003745.1 Hibiscus syriacus cultivar Beakdansim tig00008015_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  54363

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
214--321
30
3.5
30
76
14
105
36
29
22
12
1.90
384--430
20
2.4
19
79
10
58
14
36
14
34
1.88
1507--1550
21
2.1
21
91
0
70
43
0
0
56
0.99
1470--1564
31
3.0
31
71
11
77
41
2
1
55
1.18
8176--8237
27
2.4
27
84
7
85
20
51
3
24
1.62
11837--11958
30
4.0
30
87
4
129
36
20
13
30
1.91
12049--12107
31
1.9
31
85
0
82
55
22
6
15
1.63
16464--16508
20
2.2
20
92
0
72
26
11
33
28
1.91
17152--17182
3
10.3
3
92
0
53
67
3
0
29
1.06
20744--20793
21
2.4
21
93
0
91
8
18
24
50
1.73
24793--24859
30
2.2
30
89
5
100
25
17
7
49
1.73
25773--25844
30
2.4
31
83
2
83
50
19
11
19
1.77
25780--25844
31
2.1
30
82
2
76
52
16
10
20
1.73
26422--26497
21
3.6
21
87
7
109
23
0
7
68
1.16
27435--27468
17
1.9
18
88
5
52
50
5
11
32
1.63
34831--34884
25
2.2
25
83
6
65
25
7
7
59
1.51
38076--38112
13
2.9
13
92
4
58
48
0
0
51
1.00
41255--41618
138
2.6
138
90
0
568
23
20
22
32
1.98
41660--41784
61
2.0
62
93
3
216
38
0
24
36
1.61
41851--41881
14
2.2
14
100
0
62
25
0
16
58
1.38
41989--42061
34
2.1
34
92
0
119
36
6
6
49
1.56
42579--42635
21
2.8
20
81
7
69
29
19
29
21
1.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
44229--44281
22
2.5
22
84
9
65
60
1
0
37
1.08

Tables:   1

The End!