Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003748.1 Hibiscus syriacus cultivar Beakdansim tig00008024_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  73290

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3940--4000
20
3.0
20
70
4
50
26
1
19
52
1.55
15521--15581
3
20.3
3
100
0
122
67
0
0
32
0.91
15917--16013
48
2.0
48
85
0
131
10
24
24
40
1.86
22290--22328
3
12.7
3
83
5
51
64
0
33
2
1.08
25702--25829
60
2.1
60
82
0
148
45
7
7
39
1.60
26841--26866
13
2.0
13
100
0
52
23
0
30
46
1.53
27352--27394
2
21.5
2
100
0
86
48
0
0
51
1.00
28485--28534
18
3.1
16
81
13
66
42
10
24
24
1.85
30398--30433
18
2.0
18
94
0
63
69
0
5
25
1.10
47001--47060
2
30.0
2
100
0
120
50
0
0
50
1.00
51163--51199
18
2.1
18
100
0
74
27
5
10
56
1.55
59682--59706
2
12.5
2
100
0
50
52
0
0
48
1.00
59706--59734
2
14.5
2
100
0
58
51
0
48
0
1.00
61724--61753
4
7.2
4
92
7
51
53
23
0
23
1.46
66486--66538
26
2.0
26
100
0
106
33
22
3
39
1.72
72059--72114
28
2.0
28
93
6
96
12
35
32
19
1.89

Tables:   1

The End!