Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003749.1 Hibiscus syriacus cultivar Beakdansim tig00008025_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  69192

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
965--998
15
2.3
15
94
0
59
32
32
20
14
1.93
1081--1153
28
2.6
28
93
2
130
19
20
16
43
1.88
1158--1182
12
2.1
12
100
0
50
40
24
0
36
1.55
1540--1642
44
2.3
44
80
6
111
29
14
19
36
1.91
4696--4879
63
2.9
63
83
6
212
34
19
19
26
1.95
5327--5407
29
2.8
29
90
3
128
45
16
19
18
1.85
10258--10367
29
3.8
29
92
2
186
18
20
16
45
1.86
10763--10868
45
2.4
45
80
10
110
28
14
19
37
1.91
13080--13157
38
2.1
38
97
0
147
28
19
23
29
1.98
20405--20460
23
2.4
23
88
5
78
28
23
16
32
1.96
22046--22099
21
2.6
21
81
0
72
27
0
20
51
1.47
33376--33427
14
4.0
14
76
19
58
11
5
23
59
1.53
33371--33445
24
3.1
24
88
0
105
12
6
21
60
1.55
34272--34306
16
2.2
16
94
0
61
8
5
22
62
1.45
34295--34477
85
2.2
85
92
0
303
42
10
10
37
1.73
36247--36342
40
2.4
40
92
0
156
18
17
26
37
1.93
50960--51005
23
2.0
23
100
0
92
34
17
21
26
1.95
58012--58044
15
2.3
15
89
5
50
27
0
0
72
0.85
58013--58062
25
2.1
23
85
7
64
26
0
0
74
0.83
58265--58291
8
3.4
8
100
0
54
33
0
0
66
0.92
59595--59655
24
2.5
24
91
2
104
49
0
8
42
1.32
61468--61509
20
2.1
20
86
8
59
30
14
26
28
1.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
61704--61755
2
26.0
2
100
0
104
50
0
0
50
1.00

Tables:   1

The End!