Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003750.1 Hibiscus syriacus cultivar Beakdansim tig00008028_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35833

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2770--2806
16
2.4
16
90
4
58
13
24
0
62
1.31
7259--7551
145
2.0
145
99
0
577
37
12
20
29
1.90
7674--7721
20
2.5
20
89
3
71
35
0
25
39
1.56
11148--11184
16
2.4
16
90
4
58
13
24
0
62
1.31
12750--12797
20
2.5
20
89
3
71
35
0
25
39
1.56
14362--14397
17
2.1
17
94
0
63
38
11
16
33
1.84
15606--15642
16
2.4
16
90
4
58
13
24
0
62
1.31
17205--17252
20
2.5
20
89
3
71
35
0
25
39
1.56
18195--18219
10
2.5
10
100
0
50
64
0
0
36
0.94
20964--21000
16
2.4
16
90
4
58
13
24
0
62
1.31
22701--22738
16
2.4
16
91
4
60
13
23
0
63
1.30
24289--24332
20
2.2
20
88
4
63
38
0
25
36
1.56
29845--29881
16
2.4
16
90
4
58
13
24
0
62
1.31
31317--31361
19
2.4
19
88
0
63
37
0
24
37
1.56
33083--33121
20
2.0
20
90
5
62
33
17
5
43
1.72
34193--34267
31
2.4
30
84
4
87
34
30
21
13
1.92

Tables:   1

The End!