Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003759.1 Hibiscus syriacus cultivar Beakdansim tig00008051_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  52647

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
243--306
21
3.1
21
90
2
94
15
31
10
42
1.82
2508--2554
20
2.4
19
79
10
58
19
14
10
55
1.68
2475--2947
181
2.6
182
89
0
687
27
16
13
42
1.85
9364--9446
30
2.8
30
78
7
82
49
20
2
27
1.61
9375--9619
120
2.0
120
92
0
400
36
30
6
26
1.82
9491--9566
30
2.6
29
79
8
82
44
21
2
31
1.66
10046--10093
14
3.5
14
80
5
53
54
0
0
45
0.99
14247--14323
30
2.6
29
84
8
102
24
12
12
49
1.77
17717--17753
19
1.9
19
88
0
56
48
2
8
40
1.47
17956--17990
3
11.7
3
93
0
61
31
0
2
65
1.07
21472--21597
60
2.1
60
85
2
164
31
17
18
32
1.94
22503--22541
2
19.5
2
100
0
78
51
0
0
48
1.00
22527--22601
22
3.5
22
76
10
75
34
1
1
62
1.12
22892--22921
3
10.0
3
92
0
51
30
0
3
66
1.07
27160--27216
29
2.0
29
96
0
105
31
31
7
29
1.84
33036--33265
64
3.6
63
80
5
210
26
17
26
28
1.98
33164--33214
19
2.7
19
85
8
70
25
15
35
23
1.94
33058--33265
65
3.2
64
81
11
210
27
17
25
29
1.97
41610--41839
64
3.6
63
80
5
210
26
17
26
28
1.98
41738--41788
19
2.7
19
85
8
70
25
15
35
23
1.94
41632--41839
65
3.2
64
81
11
210
27
17
25
29
1.97
49104--49130
2
13.5
2
100
0
54
48
0
0
51
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
50026--50345
157
2.0
157
98
0
613
35
17
15
31
1.91

Tables:   1

The End!