Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003760.1 Hibiscus syriacus cultivar Beakdansim tig00008059_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  65825

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3988--4092
29
3.7
28
87
10
160
28
25
11
34
1.91
3988--4092
55
1.9
56
96
2
194
28
25
11
34
1.91
7786--7872
35
2.5
34
80
12
97
56
8
8
27
1.56
8090--8121
15
2.1
15
100
0
64
6
34
25
34
1.81
10154--10187
16
2.1
17
94
5
61
61
2
5
29
1.34
10156--10196
17
2.5
16
84
7
55
60
2
2
34
1.23
10560--10643
29
2.9
28
82
8
98
42
8
10
38
1.70
39292--39321
15
2.0
15
100
0
60
33
20
20
26
1.97
46089--46118
15
1.9
16
93
6
53
23
6
30
40
1.80
53393--53423
15
2.0
16
93
6
55
38
0
0
61
0.96
57655--57749
35
2.7
35
80
1
102
41
26
3
29
1.71
57911--58194
146
1.9
146
90
4
448
36
7
8
47
1.61
58681--58760
35
2.3
35
82
0
97
36
2
20
41
1.66
64459--64553
36
2.7
36
93
1
156
24
5
53
16
1.63

Tables:   1

The End!