Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003761.1 Hibiscus syriacus cultivar Beakdansim tig00008060_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  73734

Tables:   1   

This is table  1  of  1  ( 37 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4032--4068
19
1.9
19
94
0
65
21
2
18
56
1.54
5944--5978
12
2.9
12
100
0
70
51
8
8
31
1.63
14772--14829
29
2.0
29
86
0
80
15
36
25
22
1.94
14886--14958
33
2.2
33
85
0
92
27
24
36
10
1.89
14901--14970
33
2.1
33
84
5
88
28
22
40
8
1.84
14974--15030
29
2.0
29
100
0
114
19
28
38
14
1.90
15058--15082
12
2.1
12
100
0
50
16
36
8
40
1.77
15355--15381
2
13.5
2
100
0
54
51
0
0
48
1.00
21224--21270
25
1.9
24
87
12
69
53
17
0
29
1.44
21571--21691
31
3.8
32
77
7
122
32
19
18
29
1.96
23222--23291
34
2.1
32
89
5
104
21
31
15
31
1.95
23506--23545
21
1.9
21
90
10
64
12
10
37
40
1.77
23573--23613
21
2.0
21
90
0
64
31
26
21
19
1.97
23707--23751
23
2.0
23
90
0
72
13
26
40
20
1.89
23841--23898
30
2.0
29
90
10
91
44
17
5
32
1.70
23841--23900
29
2.0
30
93
6
104
43
16
6
33
1.74
24161--24200
20
2.0
20
85
4
55
7
25
47
20
1.75
24182--24211
15
2.0
15
100
0
60
13
26
33
26
1.93
24162--24232
36
2.0
35
83
8
90
12
28
35
23
1.92
24328--24387
29
2.0
31
93
6
106
43
16
6
33
1.74
26143--26320
64
2.8
62
81
11
191
26
17
25
29
1.98
26163--26350
64
2.9
61
81
10
180
28
17
24
29
1.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
31736--31775
21
1.9
21
85
10
55
35
10
2
52
1.48
34748--34817
34
2.1
32
92
5
113
20
31
17
31
1.95
35099--35141
21
2.0
21
95
0
77
27
27
20
23
1.99
35177--35220
22
2.0
22
100
0
88
13
27
45
13
1.81
35254--35332
21
4.0
21
75
18
89
12
29
35
22
1.91
35276--35305
15
2.0
15
93
0
51
16
26
30
26
1.97
35255--35326
36
2.0
36
94
0
126
13
29
33
23
1.93
35422--35481
29
2.0
31
93
6
106
43
16
6
33
1.74
37672--37705
11
3.1
11
91
0
50
14
0
2
82
0.79
38700--38724
2
12.5
2
100
0
50
48
0
0
52
1.00
45505--45596
35
2.6
36
83
5
109
40
8
8
42
1.67
45500--45601
17
5.9
17
70
13
75
40
8
9
41
1.69
51626--51714
32
2.8
32
81
3
101
31
19
19
30
1.96
52654--52727
18
3.6
20
72
22
64
22
24
27
25
2.00
56297--56332
18
1.9
19
88
5
56
66
0
27
5
1.13

Tables:   1

The End!